STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
map3k10Mitogen-activated protein kinase kinase kinase 10. (1120 aa)    
Predicted Functional Partners:
LOC114432068
T-cell surface glycoprotein CD3 zeta chain-like.
   
 0.859
map2k7
Mitogen-activated protein kinase kinase 7.
   
0.851
tab1
TGF-beta activated kinase 1 (MAP3K7) binding protein 1.
  
 0.832
traf6
TNF receptor associated factor 6.
   
 0.829
LOC114437253
Ubiquitin-conjugating enzyme E2 variant 3-like.
   
 0.784
mib2
Mindbomb E3 ubiquitin protein ligase 2.
   
 0.780
myd88
MYD88 innate immune signal transduction adaptor.
   
 0.773
ENSPRNP00000015481
annotation not available
    
 0.772
MLKL
Mixed lineage kinase domain-like protein.
    
0.763
tradd
TNFRSF1A associated via death domain.
   
 0.760
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.