STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wdr18WD repeat domain 18. (430 aa)    
Predicted Functional Partners:
tex10
Testis expressed 10.
   
 0.999
cdt1
Chromatin licensing and DNA replication factor 1.
   
 0.996
mcm4
Minichromosome maintenance complex component 4.
   
 0.996
orc2
Origin recognition complex subunit 2.
    
  0.995
cdc6
Cell division cycle 6.
   
 0.995
gnl2
G protein nucleolar 2.
  
 0.995
nle1
Notchless homolog 1.
  
 0.995
nol9
Nucleolar protein 9.
   
 0.993
cep152
Centrosomal protein 152.
   
 0.991
sdad1
SDA1 domain containing 1.
   
 
 0.990
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.