STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114436405Cysteine-rich with EGF-like domain protein 1. (272 aa)    
Predicted Functional Partners:
ENSPRNP00000006305
annotation not available
     
 0.575
LOC114433133
interleukin-17F-like.
     
 0.575
LOC114428801
interleukin-17F-like.
     
 0.575
hyou1
Hypoxia up-regulated 1.
   
 
 0.516
hspa5
Heat shock protein family A (Hsp70) member 5.
   
 
 0.432
sdf2l1
Stromal cell derived factor 2 like 1.
   
 
 0.411
LOC114446067
Stromal cell-derived factor 2-like.
   
 
 0.411
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.