STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP31Ubiquitin carboxyl-terminal hydrolase 31-like. (1295 aa)    
Predicted Functional Partners:
usp10
Ubiquitin specific peptidase 10.
    
0.748
traf6
TNF receptor associated factor 6.
    
 0.715
pcna
Proliferating cell nuclear antigen.
   
  0.715
mrps9
Mitochondrial ribosomal protein S9.
   
 
 0.707
mrps14
Mitochondrial ribosomal protein S14.
    
 0.706
rps27a
Ribosomal protein S27a.
    
 0.704
mrpl3
Mitochondrial ribosomal protein L3.
   
 
 0.703
MRPL21
Mitochondrial ribosomal protein L21.
   
 
 0.702
mrpl11
Mitochondrial ribosomal protein L11.
   
 
 0.701
rps2
Ribosomal protein S2.
    
 
 0.692
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.