STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114426021Ras-associated and pleckstrin homology domains-containing protein 1-like. (1474 aa)    
Predicted Functional Partners:
tlnrd1
Talin rod domain containing 1.
    
 0.757
LOC114451975
Talin-2-like.
    
 0.757
LOC114443648
Talin-1.
    
 0.757
LOC114433104
Talin-2.
    
 0.757
grb2
Growth factor receptor bound protein 2.
    
 0.754
LOC114435559
Ras-related protein Rap-1A-like.
    
 0.743
LOC114439151
Ras-related protein Rap-1A.
    
 0.743
rap1b
RAP1B, member of RAS oncogene family.
    
 0.743
LOC114427435
ena/VASP-like protein.
    
 0.716
LOC114445695
Vasodilator-stimulated phosphoprotein-like.
    
 0.716
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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