STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114429699Tricarboxylate transport protein, mitochondrial. (252 aa)    
Predicted Functional Partners:
cs
Citrate synthase.
   
 
 0.796
pole2
DNA polymerase epsilon 2, accessory subunit.
   
   0.695
c6hxorf56
Chromosome 6 CXorf56 homolog.
    
   0.681
drg1
Developmentally regulated GTP binding protein 1.
    
   0.681
c19h15orf40
Chromosome 19 C15orf40 homolog.
    
   0.681
slc25a4
Solute carrier family 25 member 4.
   
 
0.620
LOC114442793
ADP/ATP translocase 2-like.
   
 
0.620
SLC25A5
ADP/ATP translocase 3.
   
 
0.620
lipt2
Lipoyl(octanoyl) transferase 2.
    
 0.601
drg2
Developmentally regulated GTP binding protein 2.
    
   0.590
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.