STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114426408Uncharacterized LOC114426408. (795 aa)    
Predicted Functional Partners:
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.983
fras1
Fraser extracellular matrix complex subunit 1.
   
 0.793
hgfac
HGF activator.
    
 0.770
HABP2
Hyaluronan binding protein 2.
    
 0.770
ENSPRNP00000042338
annotation not available
    
 0.770
LOC114446857
Hyaluronan-binding protein 2-like.
    
 0.770
dock4
Dedicator of cytokinesis 4.
   
  0.724
rps21
Ribosomal protein S21.
   
  0.693
rps28
Ribosomal protein S28.
   
  0.692
rps15
Ribosomal protein S15.
   
  0.692
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.