STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000007048Hydroxycarboxylic acid receptor 1-3. (324 aa)    
Predicted Functional Partners:
nts
Neurotensin.
    
  0.525
edn1
Endothelin 1.
    
  0.525
ENSPRNP00000051160
Leucine-rich repeats and guanylate kinase domain containing.
    
  0.497
rxfp2
Relaxin family peptide receptor 2.
     
 0.487
rxfp1
Relaxin family peptide receptor 1.
     
 0.487
gal
Galanin and GMAP prepropeptide.
    
  0.455
penk
Proenkephalin.
    
 0.454
ENSPRNP00000025996
annotation not available
    
  0.450
nmu
Neuromedin U.
    
  0.448
LOC114436215
Ghrelin-like.
    
  0.441
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.