STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
akap17aA-kinase anchoring protein 17A. (672 aa)    
Predicted Functional Partners:
CAAP1
Caspase activity and apoptosis inhibitor 1.
    
   0.627
asmtl
Acetylserotonin O-methyltransferase like.
      
 0.602
sh3rf3
SH3 domain containing ring finger 3.
      
 0.602
gtpbp6
GTP binding protein 6 (putative).
   
  
 0.564
mrpl30
Mitochondrial ribosomal protein L30.
      
 0.547
mitd1
Microtubule interacting and trafficking domain containing 1.
      
 0.539
tmem121
Transmembrane protein 121.
      
 0.539
LOC114439275
N-acetylmuramoyl-L-alanine amidase-like.
      
 0.538
unc50
Unc-50 inner nuclear membrane RNA binding protein.
      
 0.531
LOC114442417
Ras-related protein Rab-33B-like.
      
 0.475
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.