STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114448813Solute carrier family 40 member 1-like. (571 aa)    
Predicted Functional Partners:
slc40a1
Solute carrier family 40 member 1.
  
  
 
0.838
hephl1
Hephaestin like 1.
    
 0.755
LOC114435092
Ceruloplasmin-like.
    
 0.755
edil3
EGF like repeats and discoidin domains 3.
    
 0.732
LOC114442840
Coagulation factor VIII-like.
    
 0.732
f5
Coagulation factor V.
    
 0.732
RS1
Retinoschisin 1.
    
 0.679
ENSPRNP00000020980
annotation not available
    
 0.679
LOC114425995
Neuropilin-2-like.
    
 0.679
LOC114448411
Neuropilin-2-like.
    
 0.679
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.