STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MEGF11Multiple epidermal growth factor-like domains protein 11. (1058 aa)    
Predicted Functional Partners:
tnfrsf13b
TNF receptor superfamily member 13B.
    
 0.686
LOC114440953
Interleukin-1 beta-like.
    
 0.684
LOC114426775
Interleukin-1 receptor-like 1.
    
 0.681
LOC114426035
Interleukin-1 receptor type 1-like.
    
  0.659
ENSPRNP00000034920
annotation not available
    
  0.659
lama1
Laminin subunit alpha 1.
    
 
0.636
ENSPRNP00000042998
Laminin, alpha 2.
    
 
0.636
gulp1
GULP PTB domain containing engulfment adaptor 1.
   
 
 0.633
ENSPRNP00000047985
RP1 axonemal microtubule associated.
   
 0.619
ENSPRNP00000054274
annotation not available
   
 0.619
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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