STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000007252annotation not available (184 aa)    
Predicted Functional Partners:
bace2
Beta-secretase 2.
   
 0.715
bace1
Beta-secretase 1.
   
 0.715
vta1
Vesicle trafficking 1.
    
   0.679
LOC114432888
Cathepsin D.
    
  0.643
ren
Renin.
    
  0.643
LOC114439488
Cathepsin D-like.
    
  0.643
LOC114432115
Cathepsin E-like.
    
  0.643
LOC114437176
Gastricsin-like.
    
  0.643
LOC114437265
Pepsin A-like.
    
  0.643
ifitm5
Interferon induced transmembrane protein 5.
    
  0.643
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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