STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000007302annotation not available (87 aa)    
Predicted Functional Partners:
mysm1
Myb like, SWIRM and MPN domains 1.
   
 0.994
ubxn7
UBX domain protein 7.
    
 0.994
trip12
Thyroid hormone receptor interactor 12.
   
 0.970
nbr1
NBR1 autophagy cargo receptor.
   
 0.959
LOC114437093
Next to BRCA1 gene 1 protein-like.
   
 0.959
traf7
TNF receptor associated factor 7.
    
 0.954
rps25
Ribosomal protein S25.
   
 0.947
rps24
Ribosomal protein S24.
   
 0.945
rps3a
Ribosomal protein S3A.
   
 0.942
rps18
Ribosomal protein S18.
   
 0.937
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.