STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114451142Apoptotic chromatin condensation inducer in the nucleus-like. (1149 aa)    
Predicted Functional Partners:
sap18
Sin3A associated protein 18.
   
 0.990
LOC114437303
RNA-binding protein with serine-rich domain 1-like.
   
 0.977
rnps1
RNA binding protein with serine rich domain 1.
   
 0.977
pnn
Pinin, desmosome associated protein.
   
 0.952
eif4a3
Eukaryotic translation initiation factor 4A3.
    
 0.918
pabpn1
poly(A) binding protein nuclear 1.
   
 0.916
PABPN1L
PABPN1 like, cytoplasmic.
   
 0.915
magoh
Mago homolog, exon junction complex subunit.
    
 0.914
LOC114440018
Serine/arginine repetitive matrix protein 2-like.
   
 
 0.881
alyref
Aly/REF export factor.
   
 0.863
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.