STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114433933Very-long-chain 3-oxoacyl-CoA reductase-B-like. (319 aa)    
Predicted Functional Partners:
LOC114453098
Very-long-chain enoyl-CoA reductase-like.
   
 0.958
LOC114440558
Very-long-chain enoyl-CoA reductase-like.
   
 0.958
tecr
trans-2,3-enoyl-CoA reductase.
   
 0.958
hacd2
3-hydroxyacyl-CoA dehydratase 2.
   
 0.948
hacd1
3-hydroxyacyl-CoA dehydratase 1.
   
 0.948
HACD3
Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase-like.
   
 0.944
hacd3
3-hydroxyacyl-CoA dehydratase 3.
   
 0.944
LOC114450604
Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4-like.
   
 0.944
LOC114433982
Aromatase-like.
  
 0.920
hsd17b8
Hydroxysteroid 17-beta dehydrogenase 8.
 
 
 0.918
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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