STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
calm2Calmodulin 2. (150 aa)    
Predicted Functional Partners:
LOC114437426
Calcineurin subunit B type 1-like.
   
0.893
camk4
Calcium/calmodulin dependent protein kinase IV.
   
 0.883
ENSPRNP00000012361
annotation not available
    
 0.877
RYR2
Ryanodine receptor 2.
    
 0.877
LOC114428552
Ryanodine receptor 3-like.
    
 0.877
LOC114446821
Ryanodine receptor 2-like.
    
 0.877
LOC114435557
Inositol 1,4,5-trisphosphate receptor type 1-like.
    
 0.874
mylk4
Myosin light chain kinase family member 4.
   
 0.869
camk2a
Calcium/calmodulin dependent protein kinase II alpha.
   
 0.867
LOC114440886
Calcium/calmodulin-dependent protein kinase type II subunit beta.
   
 0.867
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.