STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttc7aTetratricopeptide repeat domain 7A. (892 aa)    
Predicted Functional Partners:
ENSPRNP00000007750
annotation not available
    
 
 0.889
pi4ka
Phosphatidylinositol 4-kinase alpha.
    
 
 0.889
efr3b
EFR3 homolog B.
   
 
 0.862
fam126a
Family with sequence similarity 126 member A.
    
 
 0.851
efr3a
EFR3 homolog A.
   
 
 0.814
ENSPRNP00000005653
annotation not available
   
 
 0.776
fam126b
Family with sequence similarity 126 member B.
    
 
 0.765
tmem150a
Transmembrane protein 150A.
      
 0.536
PCMT1
protein-L-isoaspartate(D-aspartate) O-methyltransferase.
      
 0.487
tmed6
Transmembrane p24 trafficking protein 6.
      
 0.482
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.