STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114446214Rho GTPase-activating protein 7-like. (1080 aa)    
Predicted Functional Partners:
LOC114436203
Tensin-2-like.
    
 
 0.670
TNS3
Tensin-3-like.
    
 
 0.670
TNS3-2
Tensin 3.
    
 
 0.670
LOC114437929
Tensin-2-like.
    
 
 0.670
LOC114426506
Tensin-1-like.
    
 
 0.670
LOC114448732
SH3 domain-containing kinase-binding protein 1-like.
   
   0.510
sh3kbp1
SH3 domain containing kinase binding protein 1.
   
   0.510
cd2ap
CD2 associated protein.
   
   0.510
LOC114452359
Uncharacterized LOC114452359.
   
  0.409
arl1
ADP ribosylation factor like GTPase 1.
   
  0.409
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.