STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114450811NEDD8-like. (85 aa)    
Predicted Functional Partners:
mysm1
Myb like, SWIRM and MPN domains 1.
   
 0.995
ubxn7
UBX domain protein 7.
    
 0.994
rbx1
Ring-box 1.
   
 0.987
senp8
SUMO peptidase family member, NEDD8 specific.
    
 0.983
nae1
NEDD8 activating enzyme E1 subunit 1.
   
 0.982
cops5
COP9 signalosome subunit 5.
   
 0.981
COPS6
COP9 signalosome subunit 6.
   
 0.981
cul2
Cullin 2.
    
 0.979
gps1
G protein pathway suppressor 1.
    
 0.968
LOC114431358
Proteasome subunit beta type-6-like.
   
 0.966
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.