STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114426759Atypical chemokine receptor 3-like. (382 aa)    
Predicted Functional Partners:
LOC114433183
Stromal cell-derived factor 1-like.
    
 0.967
LOC114447034
Stromal cell-derived factor 1-like.
    
 0.967
LOC114449745
C-X-C chemokine receptor type 4-like.
    
0.929
cxcr4
C-X-C motif chemokine receptor 4.
    
0.929
atp5po
ATP synthase peripheral stalk subunit OSCP.
    
   0.704
LOC114435108
C-C motif chemokine 25-like.
    
 0.696
atp5f1a
ATP synthase F1 subunit alpha.
    
   0.668
LOC114442081
ATP synthase subunit alpha, mitochondrial-like.
    
   0.668
LOC114432702
ATP synthase subunit beta, mitochondrial.
    
   0.588
LOC114426249
ATP synthase subunit beta, mitochondrial-like.
    
   0.588
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.