STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114426095Serine/threonine-protein kinase 24-like. (447 aa)    
Predicted Functional Partners:
lrsam1
Leucine rich repeat and sterile alpha motif containing 1.
   
 
 0.874
LOC114426690-2
MOB-like protein phocein.
    
 
 0.805
pdcd10
Programmed cell death 10.
    
 
 0.784
LOC114428022
Programmed cell death protein 10.
    
 
 0.784
LOC114446978
Calcium-binding protein 39-like.
    
 
 0.766
LOC114442160
Calcium-binding protein 39-like.
    
 
 0.766
cab39
Calcium binding protein 39.
    
 
 0.766
LOC114444787
Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform.
   
 
 0.765
strip1
Striatin interacting protein 1.
    
 
 0.761
LOC114436085
CTTNBP2 N-terminal-like protein.
    
 
 0.738
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.