STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hnrnpuHeterogeneous nuclear ribonucleoprotein U. (799 aa)    
Predicted Functional Partners:
LOC114434467
Heterogeneous nuclear ribonucleoprotein M-like.
   
 0.960
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.936
LOC114443846
Heterogeneous nuclear ribonucleoprotein K-like.
   
 0.936
ENSPRNP00000020677
DEAH (Asp-Glu-Ala-His) box helicase 9.
   
 0.931
LOC114449931
Heterogeneous nuclear ribonucleoprotein C-like.
   
 0.925
ENSPRNP00000056581
annotation not available
    
 0.923
LOC114438077
Heterogeneous nuclear ribonucleoprotein A1-like.
   
 0.906
hnrnpa3
Heterogeneous nuclear ribonucleoprotein A3.
   
 0.906
rbmx
RNA binding motif protein X-linked.
   
 0.888
gnl3l
G protein nucleolar 3 like.
    
 0.880
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.