STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114433713G1/S-specific cyclin-D1. (292 aa)    
Predicted Functional Partners:
cdk6
Cyclin dependent kinase 6.
   
 0.971
rb1
RB transcriptional corepressor 1.
    
 0.957
rbl1
RB transcriptional corepressor like 1.
    
 0.948
LOC114451377
Retinoblastoma-like protein 2.
    
 0.948
LOC114436058
Cyclin-dependent kinase inhibitor 1-like.
   
 0.946
ENSPRNP00000006841
annotation not available
   
 0.936
LOC114453476
Cyclin-dependent kinase inhibitor 1-like.
   
 0.936
cdkn1b
Cyclin dependent kinase inhibitor 1B.
   
 0.936
LOC114452721
Cyclin-dependent kinase inhibitor 1C-like.
   
 0.936
pcna
Proliferating cell nuclear antigen.
    
 0.932
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.