STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tor3aTorsin family 3 member A. (367 aa)    
Predicted Functional Partners:
cops4
COP9 signalosome subunit 4.
   
  0.688
LOC114434249
torsin-1A-interacting protein 2-like.
   
 0.660
LOC114434250
torsin-1A-interacting protein 2-like.
   
 0.660
cops2
COP9 signalosome subunit 2.
   
 
  0.631
cops8
COP9 signalosome subunit 8.
   
 
  0.624
COPS6
COP9 signalosome subunit 6.
   
 
  0.622
rft1
RFT1 homolog.
      
 0.533
mrps18a
Mitochondrial ribosomal protein S18A.
      
 0.532
LOC114434950
Podocin-like.
      
 0.481
cep350
Centrosomal protein 350.
      
 0.459
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.