STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nudt13Nudix hydrolase 13. (341 aa)    
Predicted Functional Partners:
nudt15
Nudix hydrolase 15.
    
 0.929
nudt5
Nudix hydrolase 5.
    
 0.922
naprt
Chromosome 4 C8orf82 homolog.
    
 0.919
rfk
Riboflavin kinase.
  
 
 0.900
icmt
Isoprenylcysteine carboxyl methyltransferase.
    
 0.878
nadsyn1
NAD synthetase 1.
  
 
 0.868
nadk2
NAD kinase 2, mitochondrial.
     
 0.866
QPRT
Quinolinate phosphoribosyltransferase.
    
 0.856
nudt12
Nudix hydrolase 12.
 
  
0.856
LOC114428432
5'-nucleotidase-like.
    
  0.854
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.