STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpp30Ribonuclease P/MRP subunit p30. (351 aa)    
Predicted Functional Partners:
pop4
POP4 homolog, ribonuclease P/MRP subunit.
   
 0.999
pop1
POP1 homolog, ribonuclease P/MRP subunit.
   
 0.999
LOC114434157
Ribonuclease P protein subunit p21-like.
   
 0.999
pop5
POP5 homolog, ribonuclease P/MRP subunit.
  
 0.999
RPP25
Ribonuclease P protein subunit p25-like protein.
    
 0.997
rpp40
Ribonuclease P/MRP subunit p40.
    
 0.997
ENSPRNP00000054619
annotation not available
   
 0.997
kri1
KRI1 homolog.
   
  0.994
snu13
Small nuclear ribonucleoprotein 13.
   
 0.989
nhp2
NHP2 ribonucleoprotein.
   
 0.988
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.