STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000007909annotation not available (270 aa)    
Predicted Functional Partners:
elac2
elaC ribonuclease Z 2.
  
   0.709
elac1
elaC ribonuclease Z 1.
  
   0.709
aifm1
Apoptosis inducing factor mitochondria associated 1.
    
 
 0.642
LOC114426489
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial.
   
    0.571
LOC114448385
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial-like.
   
    0.571
LOC114450478
Probable flap endonuclease 1 homolog.
   
 
 0.480
fen1
Flap structure-specific endonuclease 1.
   
 
 0.480
birc6
Baculoviral IAP repeat containing 6.
    
 
 0.432
aifm3
Apoptosis inducing factor mitochondria associated 3.
    
 
 0.401
LOC114445403
Apoptosis-inducing factor 3-like.
    
 
 0.401
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.