STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114439010Putative oxidoreductase YteT. (437 aa)    
Predicted Functional Partners:
galk2
Galactokinase 2.
  
 0.901
galk1
Galactokinase 1.
  
 0.901
miox
Myo-inositol oxygenase.
   
 
 0.866
gale
UDP-galactose-4-epimerase.
  
 
 0.850
TGDS
TDP-glucose 4,6-dehydratase.
  
 
 0.827
lipt2
Lipoyl(octanoyl) transferase 2.
    
  0.816
sord
Sorbitol dehydrogenase.
  
 
 0.809
galm
Galactose mutarotase.
  
 
 0.804
kars1
lysyl-tRNA synthetase 1.
  
    0.768
h6pd
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
  
 0.761
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.