STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114438830Extended synaptotagmin-1-like. (931 aa)    
Predicted Functional Partners:
LOC114432947
Intersectin-2-like.
    
0.660
LOC114447695
Intersectin-1-like.
    
0.660
LOC114447694
Intersectin-1-like.
    
0.660
ENSPRNP00000041654
annotation not available
    
0.660
LOC114439853
Growth arrest-specific protein 7-like.
    
 0.633
LOC114437477
Growth arrest-specific protein 7-like.
    
 0.633
ap2m1
Adaptor related protein complex 2 subunit mu 1.
    
 0.610
pla2g7
Phospholipase A2 group VII.
     
 0.608
LOC114438318
Rho guanine nucleotide exchange factor 25-like.
   
 
 0.606
arhgef25
Rho guanine nucleotide exchange factor 25.
   
 
 0.606
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.