STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gdpd2Glycerophosphodiester phosphodiesterase domain containing 2. (535 aa)    
Predicted Functional Partners:
pla2g4a
Phospholipase A2 group IVA.
   
 
 0.837
mboat2
Membrane bound O-acyltransferase domain containing 2.
     
 0.819
gpd2
Glycerol-3-phosphate dehydrogenase 2.
  
 0.802
ENSPRNP00000046727
annotation not available
  
 0.802
l2hgdh
L-2-hydroxyglutarate dehydrogenase.
    
 0.772
crls1
Cardiolipin synthase 1.
   
 0.725
nhej1
Non-homologous end joining factor 1.
    
 0.718
cnppd1
Cyclin Pas1/PHO80 domain containing 1.
    
 0.718
cdipt
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
   
 0.714
LOC114445432
Uncharacterized LOC114445432.
   
 0.714
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.