STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114442455Probable pancreatic secretory proteinase inhibitor. (80 aa)    
Predicted Functional Partners:
mad2l2
Mitotic arrest deficient 2 like 2.
    
   0.587
LOC114435954
Macrophage-stimulating protein receptor-like.
    
  0.543
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.543
mst1r
Macrophage stimulating 1 receptor.
    
  0.543
bmp8a
Bone morphogenetic protein 8a.
    
 0.516
gdf6
Growth differentiation factor 6.
    
 0.516
bmp5
Bone morphogenetic protein 5.
    
 0.516
LOC114436104
Bone morphogenetic protein 7-like.
    
 0.516
LOC114428993
Left-right determination factor 2-like.
    
 0.516
bmp6
Bone morphogenetic protein 6.
    
 0.516
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.