STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
b9d1B9 domain containing 1. (206 aa)    
Predicted Functional Partners:
b9d2
B9 domain containing 2.
  
0.997
tmem231
Transmembrane protein 231.
   
 0.989
mks1
MKS transition zone complex subunit 1.
    
0.985
tctn2
Tectonic family member 2.
   
 0.976
cc2d2a
Coiled-coil and C2 domain containing 2A.
    
 0.975
tmem107
Transmembrane protein 107.
   
 0.971
LOC114437611
Transmembrane protein 17B-like.
    
 0.967
ENSPRNP00000015811
annotation not available
    
 0.956
ahi1
Abelson helper integration site 1.
    
 0.950
tctn3
Tectonic family member 3.
    
 0.948
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.