STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114441482Mixed lineage kinase domain-like protein. (457 aa)    
Predicted Functional Partners:
pgam5
PGAM family member 5, mitochondrial serine/threonine protein phosphatase.
    
 0.924
LOC114435880
Receptor-interacting serine/threonine-protein kinase 3-like.
    
0.922
LOC114452731
Receptor-interacting serine/threonine-protein kinase 3-like.
    
0.921
hsp90aa1
Heat shock protein 90 alpha family class A member 1.
    
 0.881
hsp90ab1
Heat shock protein 90 alpha family class B member 1.
    
 0.881
chmp2a
Charged multivesicular body protein 2A.
    
 0.851
LOC114451776
Vacuolar protein sorting-associated protein 4A.
    
  0.851
VPS4B
Vacuolar protein sorting 4 homolog B.
    
  0.849
LOC114434198
Vacuolar protein sorting-associated protein 4B-like.
    
  0.849
tm9sf1
Transmembrane 9 superfamily member 1.
    
 0.849
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.