STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
osbpl9Oxysterol binding protein like 9. (740 aa)    
Predicted Functional Partners:
OSBPL10
Oxysterol-binding protein-related protein 10-like.
    
  
0.761
LOC114448741
Oxysterol-binding protein-related protein 10-like.
    
  
0.761
osbpl11
Oxysterol binding protein like 11.
    
  
0.761
gale
UDP-galactose-4-epimerase.
     
 0.721
LOC114436395
Vesicle-associated membrane protein-associated protein B-like.
   
 
 0.711
vapa
VAMP associated protein A.
   
 
 0.711
uxs1
UDP-glucuronate decarboxylase 1.
     
 0.705
VAPB
Vesicle-associated membrane protein-associated protein B/C-like.
   
 
 0.674
NPC1L1
NPC1 like intracellular cholesterol transporter 1.
   
 0.658
npc1
NPC intracellular cholesterol transporter 1.
   
 0.658
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.