STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114443436WD repeat-containing protein 5. (333 aa)    
Predicted Functional Partners:
rbbp5
RB binding protein 5, histone lysine methyltransferase complex subunit.
   
0.990
ash2l
ASH2 like, histone lysine methyltransferase complex subunit.
   
 0.988
dpy30
Dpy-30 histone methyltransferase complex regulatory subunit.
   
 0.981
kansl2
KAT8 regulatory NSL complex subunit 2.
    
 0.973
ncoa6
Nuclear receptor coactivator 6.
    
 0.965
yeats2
YEATS domain containing 2.
    
 0.959
mbip
MAP3K12 binding inhibitory protein 1.
    
 0.957
dr1
Down-regulator of transcription 1.
   
 0.957
sgf29
SAGA complex associated factor 29.
    
 0.953
kat14
Lysine acetyltransferase 14.
    
 0.951
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.