STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000008129Si:dkey-178k16.1. (465 aa)    
Predicted Functional Partners:
LOC114447795
Peripheral plasma membrane protein CASK-like.
   
 0.749
CASK
Calcium/calmodulin dependent serine protein kinase.
   
 0.749
cops5
COP9 signalosome subunit 5.
    
  0.639
gps1
G protein pathway suppressor 1.
    
  0.639
mpp1
Membrane palmitoylated protein 1.
   
 0.639
ENSPRNP00000004706
annotation not available
    
  0.634
hspa5
Heat shock protein family A (Hsp70) member 5.
    
  0.630
cops2
COP9 signalosome subunit 2.
    
  0.629
COPS6
COP9 signalosome subunit 6.
    
  0.628
cops8
COP9 signalosome subunit 8.
    
  0.627
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.