STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000008169Palm2 and akap2 fusion. (707 aa)    
Predicted Functional Partners:
ENSPRNP00000008060
Palm2 and akap2 fusion.
 
    
 0.734
LOC114451812
Synemin-like.
  
 
 
 0.572
LOC114448971
Pituitary tumor-transforming gene 1 protein-interacting protein-like.
      
 0.489
LOC114440556
cAMP-dependent protein kinase catalytic subunit alpha-like.
    
 
 0.484
prkaca
Protein kinase cAMP-activated catalytic subunit alpha.
    
 
 0.484
ENSPRNP00000042632
annotation not available
    
 
 0.484
prkacb
Protein kinase cAMP-activated catalytic subunit beta.
    
 
 0.484
gbe1
1,4-alpha-glucan branching enzyme 1.
      
 0.478
akap7
A-kinase anchoring protein 7.
      
 0.472
thoc1
THO complex 1.
      
 0.465
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.