STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mst1Macrophage stimulating 1. (730 aa)    
Predicted Functional Partners:
LOC114435954
Macrophage-stimulating protein receptor-like.
    
 0.897
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.897
mst1r
Macrophage stimulating 1 receptor.
    
 0.897
ENSPRNP00000022777
annotation not available
    
 0.867
ENSPRNP00000041769
Vascular endothelial growth factor Ab.
     
 0.845
igf1
Insulin like growth factor 1.
     
 0.844
pgf
Placental growth factor.
     
 0.840
vegfc
Vascular endothelial growth factor C.
     
 0.837
pdgfrb
Platelet derived growth factor receptor beta.
     
 0.819
tie1
Tyrosine kinase with immunoglobulin like and EGF like domains 1.
     
 0.819
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.