STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kxd1KxDL motif containing 1. (184 aa)    
Predicted Functional Partners:
borcs6
BLOC-1 related complex subunit 6.
   
 0.990
borcs8
BLOC-1 related complex subunit 8.
   
 0.978
bloc1s1
Biogenesis of lysosomal organelles complex 1 subunit 1.
    
 0.974
borcs7
BLOC-1 related complex subunit 7.
    
 0.970
borcs5
BLOC-1 related complex subunit 5.
    
 0.970
snapin
SNAP associated protein.
   
 0.969
bloc1s2
Biogenesis of lysosomal organelles complex 1 subunit 2.
    
 0.969
crebl2
cAMP responsive element binding protein like 2.
    
 0.920
LOC114439144
Proteasomal ubiquitin receptor ADRM1-like.
    
 
 0.916
RPL32
Ribosomal protein L32.
   
   0.911
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.