STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRTP1Growth hormone regulated TBC protein 1. (351 aa)    
Predicted Functional Partners:
nrde2
NRDE-2, necessary for RNA interference, domain containing.
    
 0.876
plk4
Polo like kinase 4.
    
 0.823
PLK1
Polo like kinase 1.
    
 0.823
plk3
Polo like kinase 3.
    
 0.823
plk2
Polo like kinase 2.
    
 0.823
ENSPRNP00000029885
ADP-ribosylation factor 6b.
   
 0.707
arf6
ADP ribosylation factor 6.
   
 0.707
wdr90
WD repeat domain 90.
    
   0.705
ENSPRNP00000044939
annotation not available
   
   0.666
efhb
EF-hand domain family member B.
    
   0.658
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.