STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000008286annotation not available (299 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
     
 0.926
ENSPRNP00000032703
annotation not available
    
 0.695
cdk12
Cyclin dependent kinase 12.
    
 0.695
cdk13
Cyclin dependent kinase 13.
    
 0.695
ssrp1
Structure specific recognition protein 1.
   
 0.651
actr8
Actin related protein 8.
    
  0.644
supt6h
SPT6 homolog, histone chaperone and transcription elongation factor.
   
 
 0.620
supt16h
SPT16 homolog, facilitates chromatin remodeling subunit.
    
  0.619
supt4h1
SPT4 homolog, DSIF elongation factor subunit.
     
 0.611
ccnh
Cyclin H.
     
 0.608
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.