STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
elavl3ELAV like RNA binding protein 3. (389 aa)    
Predicted Functional Partners:
LOC114438612
Embryonic polyadenylate-binding protein-like.
  
 
0.691
LOC114427624
Polyadenylate-binding protein 1.
  
 
0.690
pabpc4
poly(A) binding protein cytoplasmic 4.
  
 
0.688
pabpc1
poly(A) binding protein cytoplasmic 1.
  
 
0.685
ncl
Nucleolin.
  
0.668
tra2a
Transformer 2 alpha homolog.
  
 0.647
ENSPRNP00000029630
annotation not available
   
 0.640
LOC114443390
Uncharacterized LOC114443390.
    
 0.625
LOC114428061
Transformer-2 protein homolog beta-like.
  
 0.621
ccna2
Cyclin A2.
   
 
 0.605
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.