STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbc1d20TBC1 domain family member 20. (406 aa)    
Predicted Functional Partners:
RAB1A
Ras-related protein ORAB-1.
    
 0.886
LOC114444633
Ras-related protein ORAB-1-like.
    
 0.886
LOC114446841
Ras-related protein ORAB-1-like.
    
 0.886
LOC114450598
Ras-related protein Rab-1A-like.
    
 0.886
LOC114426340
Ras-related protein Rab-33B-like.
    
 0.734
LOC114442417
Ras-related protein Rab-33B-like.
    
 0.734
rab33a
RAB33A, member RAS oncogene family.
    
 0.734
RAB19
Ras-related protein Rab-19-like.
    
 0.713
LOC114426278
Ras-related protein Rab-19-like.
    
 0.713
LOC114431624
Ras-related protein Rab-33B-like.
    
 0.701
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.