STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tfap2cTranscription factor AP-2 gamma. (470 aa)    
Predicted Functional Partners:
wwox
WW domain containing oxidoreductase.
    
 0.734
yeats4
YEATS domain containing 4.
    
 0.695
LOC114442832
Nucleophosmin-like.
   
  0.689
LOC114445825
Nucleophosmin-like.
   
  0.689
LOC114448239
Protein DEK-like.
    
 0.688
LOC114437792
Histone acetyltransferase p300-like.
    
 0.668
LOC114440286
SUMO-conjugating enzyme UBC9-like.
    
  0.667
ube2i
Ubiquitin conjugating enzyme E2 I.
    
  0.667
ENSPRNP00000002038
annotation not available
    
 0.662
LOC114432273
Cbp/p300-interacting transactivator 3-like.
    
 0.662
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.