STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000008449annotation not available (134 aa)    
Predicted Functional Partners:
LOC114437792
Histone acetyltransferase p300-like.
    
 0.929
LOC114432586
CREB-binding protein-like.
    
 0.858
LOC114439810
CREB-binding protein-like.
    
 0.858
LOC114429195
Proto-oncogene c-Fos-like.
    
  0.831
sp1
Sp1 transcription factor.
    
  0.819
med1
Mediator complex subunit 1.
    
 0.819
LOC114442166
Mitogen-activated protein kinase 9-like.
   
  0.811
LOC114435842
Nuclear receptor coactivator 3-like.
    
 0.765
LOC114449725
Nuclear receptor coactivator 2-like.
    
 0.765
LOC114438266
Nuclear receptor coactivator 3-like.
    
 0.765
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.