STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmco3Transmembrane and coiled-coil domains 3. (677 aa)    
Predicted Functional Partners:
fancl
FA complementation group L.
     
 0.924
sord
Sorbitol dehydrogenase.
    
 0.836
LOC114433388
Ribosyldihydronicotinamide dehydrogenase [quinone]-like.
  
 0.829
LOC114426463
NAD(P)H dehydrogenase [quinone] 1-like.
  
 0.829
LOC114444840
Rhodopsin kinase 2-like.
 
   
  0.806
LOC114446159
Rhodopsin kinase-like.
 
   
  0.806
grk7
G protein-coupled receptor kinase 7.
 
   
  0.695
mboat1
Membrane bound O-acyltransferase domain containing 1.
    
  0.668
rbks
Ribokinase.
    
  0.668
LOC114446970
Adenosine kinase-like.
    
  0.668
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.