STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000008486annotation not available (247 aa)    
Predicted Functional Partners:
LOC114435954
Macrophage-stimulating protein receptor-like.
    
  0.811
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.811
mst1r
Macrophage stimulating 1 receptor.
    
  0.811
PTK7
Protein tyrosine kinase 7 (inactive).
    
  0.692
ENSPRNP00000042338
annotation not available
  
 
  0.644
hdc
Histidine decarboxylase.
  
 0.610
ddc
Dopa decarboxylase.
  
 0.610
ENSPRNP00000005691
annotation not available
    
  0.592
svep1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
  0.589
LOC114450356
Tissue factor-like.
    
  0.584
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.