STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdcd4Programmed cell death 4. (474 aa)    
Predicted Functional Partners:
LOC114444787
Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform.
    
 0.857
ppp2r3c
Protein phosphatase 2 regulatory subunit B''gamma.
     
 0.813
eif4a2
Eukaryotic translation initiation factor 4A2.
   
 0.785
EIF4A1
Eukaryotic initiation factor 4A-I-like.
   
 0.785
LOC114441272
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform.
    
 0.698
LOC114442289
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform.
    
 0.698
LOC114444006
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform-like.
    
 0.698
fnbp4
Formin binding protein 4.
    
 0.674
ppp4r1
Protein phosphatase 4 regulatory subunit 1.
    
 0.674
relch
RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing.
    
 0.674
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.