STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114436239Protein DDI1 homolog 2-like. (918 aa)    
Predicted Functional Partners:
rps27a
Ribosomal protein S27a.
   
 
 0.882
psmd14
Proteasome 26S subunit, non-ATPase 14.
   
 
 0.809
RAD23B
RAD23 homolog B, nucleotide excision repair protein.
   
 
 0.785
LOC114434054
UV excision repair protein RAD23 homolog B-like.
   
 
 0.785
rad23a
RAD23 homolog A, nucleotide excision repair protein.
   
 
 0.785
psmd2
Proteasome 26S subunit, non-ATPase 2.
    
 
 0.771
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
   0.724
ubqln4
Ubiquilin 4.
   
 
 0.693
zfand4
Zinc finger AN1-type containing 4.
   
 
 0.625
LOC114450866
Polyubiquitin 9-like.
   
 
 0.621
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.