STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ankef1Ankyrin repeat and EF-hand domain containing 1. (855 aa)    
Predicted Functional Partners:
rsph14
Radial spoke head 14 homolog.
   
  0.832
tsnaxip1
Translin associated factor X interacting protein 1.
   
  0.829
cfap99
Cilia and flagella associated protein 99.
   
  0.826
ENSPRNP00000006527
Tektin 3.
   
   0.824
LOC114434750
Radial spoke head protein 6 homolog A-like.
   
   0.797
fbxo36
F-box protein 36.
   
 
  0.778
ENSPRNP00000009787
annotation not available
   
    0.771
mars1
methionyl-tRNA synthetase 1.
   
 0.665
birc6
Baculoviral IAP repeat containing 6.
   
 0.645
traf7
TNF receptor associated factor 7.
    
  0.643
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.